Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCA5O60264 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SMARCA5O60264 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SMARCA5O60264 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCA5O60264 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SMARCA5O60264 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCA5O60264 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SMARCA5O60264 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SMARCA5O60264 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SMARCA5O60264 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.76■□□□□ 0.75
SMARCA5O60264 AZGP1P1-201ENST00000411909 902 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 METTL21AP1-201ENST00000438852 635 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCA5O60264 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.76■□□□□ 0.75
SMARCA5O60264 MIR4313-201ENST00000580760 101 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.76■□□□□ 0.75
SMARCA5O60264 AC079781.4-201ENST00000641908 219 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCA5O60264 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCA5O60264 KRT8P37-201ENST00000451609 1420 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 AC009090.5-201ENST00000624886 2285 ntBASIC19.76■□□□□ 0.75
SMARCA5O60264 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCA5O60264 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCA5O60264 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SMARCA5O60264 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCA5O60264 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCA5O60264 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCA5O60264 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCA5O60264 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.75■□□□□ 0.75
SMARCA5O60264 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCA5O60264 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCA5O60264 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCA5O60264 KRT18P28-201ENST00000453838 1332 ntBASIC19.75■□□□□ 0.75
SMARCA5O60264 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCA5O60264 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCA5O60264 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMARCA5O60264 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMARCA5O60264 AC011270.2-201ENST00000624293 2550 ntBASIC19.74■□□□□ 0.75
SMARCA5O60264 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMARCA5O60264 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCA5O60264 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms