Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXA2O43364 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXA2O43364 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
HOXA2O43364 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXA2O43364 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXA2O43364 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXA2O43364 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXA2O43364 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HOXA2O43364 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HOXA2O43364 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXA2O43364 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
HOXA2O43364 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXA2O43364 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HOXA2O43364 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXA2O43364 MIR648-201ENST00000385046 94 ntBASIC17.02■□□□□ 0.32
HOXA2O43364 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HOXA2O43364 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.02■□□□□ 0.32
HOXA2O43364 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXA2O43364 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXA2O43364 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.02■□□□□ 0.32
HOXA2O43364 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.02■□□□□ 0.32
HOXA2O43364 BNIP3P42-201ENST00000454982 569 ntBASIC17.02■□□□□ 0.32
HOXA2O43364 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXA2O43364 BNIP3P29-201ENST00000598302 571 ntBASIC17.02■□□□□ 0.32
HOXA2O43364 AC011447.5-201ENST00000616168 564 ntBASIC17.02■□□□□ 0.32
HOXA2O43364 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXA2O43364 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
HOXA2O43364 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.02■□□□□ 0.31
HOXA2O43364 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
HOXA2O43364 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HOXA2O43364 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HOXA2O43364 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
HOXA2O43364 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HOXA2O43364 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
HOXA2O43364 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.02■□□□□ 0.31
HOXA2O43364 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HOXA2O43364 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXA2O43364 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXA2O43364 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 BCRP2-202ENST00000447763 634 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 FO681548.1-201ENST00000455617 1132 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 BCRP6-201ENST00000510112 632 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 BCRP7-201ENST00000511549 544 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXA2O43364 AP001889.1-201ENST00000525414 633 ntBASIC17.01■□□□□ 0.31
HOXA2O43364 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXA2O43364 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXA2O43364 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms