Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TSPY18P-201ENST00000441642 509 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 AC108073.2-201ENST00000464002 357 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.32■□□□□ 0.2
RIPK2O43353 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.32■□□□□ 0.2
RIPK2O43353 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AC232323.1-201ENST00000540724 2099 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.32■□□□□ 0.2
RIPK2O43353 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 AL356488.2-201ENST00000602755 427 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.32■□□□□ 0.2
RIPK2O43353 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 MIR1199-201ENST00000621445 119 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 REXO1L5P-201ENST00000622260 2098 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 AC093458.2-201ENST00000623150 629 ntBASIC16.32■□□□□ 0.2
RIPK2O43353 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPK2O43353 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIPK2O43353 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RIPK2O43353 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 LINC00528-201ENST00000600723 2160 ntBASIC16.31■□□□□ 0.2
RIPK2O43353 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
RIPK2O43353 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 AC026396.1-201ENST00000419388 421 ntBASIC16.31■□□□□ 0.2
RIPK2O43353 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 SAPCD2P3-201ENST00000455031 850 ntBASIC16.31■□□□□ 0.2
RIPK2O43353 CXCL1P1-201ENST00000502804 216 ntBASIC16.31■□□□□ 0.2
RIPK2O43353 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 AF238378.1-201ENST00000526806 358 ntBASIC16.31■□□□□ 0.2
RIPK2O43353 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.31■□□□□ 0.2
RIPK2O43353 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
RIPK2O43353 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RIPK2O43353 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RIPK2O43353 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RIPK2O43353 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPK2O43353 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RIPK2O43353 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms