Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SURF4O15260 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
SURF4O15260 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.54□□□□□ -0.08
SURF4O15260 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SURF4O15260 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SURF4O15260 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SURF4O15260 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.54□□□□□ -0.08
SURF4O15260 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SURF4O15260 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 AC073439.1-201ENST00000624121 1774 ntBASIC14.53□□□□□ -0.08
SURF4O15260 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.53□□□□□ -0.08
SURF4O15260 AC108751.1-201ENST00000490852 363 ntBASIC14.53□□□□□ -0.08
SURF4O15260 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
SURF4O15260 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.53□□□□□ -0.08
SURF4O15260 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.53□□□□□ -0.08
SURF4O15260 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.53□□□□□ -0.08
SURF4O15260 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 LINC02228-204ENST00000642115 2962 ntBASIC14.53□□□□□ -0.08
SURF4O15260 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
SURF4O15260 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 AC134407.2-201ENST00000625089 1978 ntBASIC14.53□□□□□ -0.08
SURF4O15260 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
SURF4O15260 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SURF4O15260 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SURF4O15260 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SURF4O15260 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.52□□□□□ -0.08
SURF4O15260 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SURF4O15260 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.52□□□□□ -0.08
SURF4O15260 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.52□□□□□ -0.08
SURF4O15260 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SURF4O15260 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SURF4O15260 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.52□□□□□ -0.09
SURF4O15260 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.52□□□□□ -0.09
SURF4O15260 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.52□□□□□ -0.09
SURF4O15260 AC092474.2-201ENST00000424288 719 ntBASIC14.52□□□□□ -0.09
SURF4O15260 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.52□□□□□ -0.09
SURF4O15260 RNA5SP415-201ENST00000517246 115 ntBASIC14.52□□□□□ -0.09
SURF4O15260 IGHV3-22-201ENST00000520721 359 ntBASIC14.52□□□□□ -0.09
SURF4O15260 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.52□□□□□ -0.09
SURF4O15260 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.52□□□□□ -0.09
SURF4O15260 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.52□□□□□ -0.09
SURF4O15260 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SURF4O15260 Z83851.2-201ENST00000609564 659 ntBASIC14.52□□□□□ -0.09
SURF4O15260 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms