Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.73□□□□□ -0.21
SDCBPO00560 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SDCBPO00560 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.73□□□□□ -0.21
SDCBPO00560 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SDCBPO00560 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SDCBPO00560 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SDCBPO00560 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 CICP13-201ENST00000422015 2789 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 AC092919.2-201ENST00000623631 1645 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
SDCBPO00560 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 CRYGEP-201ENST00000412192 528 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 FAM185BP-201ENST00000443595 716 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 AL513480.1-201ENST00000451731 511 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 OR7E47P-204ENST00000575924 449 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SDCBPO00560 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SDCBPO00560 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.72□□□□□ -0.21
SDCBPO00560 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.72□□□□□ -0.21
SDCBPO00560 AC099063.4-201ENST00000641099 1602 ntBASIC13.72□□□□□ -0.21
SDCBPO00560 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.71□□□□□ -0.21
SDCBPO00560 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.71□□□□□ -0.21
SDCBPO00560 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.71□□□□□ -0.21
SDCBPO00560 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SDCBPO00560 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SDCBPO00560 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.71□□□□□ -0.21
SDCBPO00560 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SDCBPO00560 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SDCBPO00560 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.71□□□□□ -0.21
SDCBPO00560 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.71□□□□□ -0.21
SDCBPO00560 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms