Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK2O00526 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK2O00526 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
UPK2O00526 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK2O00526 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 AC105233.2-201ENST00000523697 349 ntBASIC12.9□□□□□ -0.34
UPK2O00526 AF228730.5-201ENST00000530288 346 ntBASIC12.9□□□□□ -0.34
UPK2O00526 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.9□□□□□ -0.34
UPK2O00526 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.9□□□□□ -0.34
UPK2O00526 AC243562.2-201ENST00000561247 970 ntBASIC12.9□□□□□ -0.34
UPK2O00526 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.9□□□□□ -0.34
UPK2O00526 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.9□□□□□ -0.34
UPK2O00526 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK2O00526 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.9□□□□□ -0.34
UPK2O00526 AC099522.2-201ENST00000607001 744 ntBASIC12.9□□□□□ -0.34
UPK2O00526 AL513190.1-201ENST00000621254 727 ntBASIC12.9□□□□□ -0.34
UPK2O00526 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 AC087481.3-201ENST00000602886 1894 ntBASIC12.9□□□□□ -0.34
UPK2O00526 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK2O00526 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
UPK2O00526 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK2O00526 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 ZNF259P1-201ENST00000407656 1365 ntBASIC12.9□□□□□ -0.34
UPK2O00526 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.9□□□□□ -0.34
UPK2O00526 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UPK2O00526 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK2O00526 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.9□□□□□ -0.35
UPK2O00526 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK2O00526 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 IL9RP2-201ENST00000423948 1312 ntBASIC12.89□□□□□ -0.35
UPK2O00526 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 DBET-201ENST00000630918 3363 ntBASIC12.89□□□□□ -0.35
UPK2O00526 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UPK2O00526 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
UPK2O00526 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.89□□□□□ -0.35
UPK2O00526 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 RNA5SP416-201ENST00000516838 111 ntBASIC12.89□□□□□ -0.35
UPK2O00526 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 AC006058.4-201ENST00000624016 1670 ntBASIC12.89□□□□□ -0.35
UPK2O00526 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UPK2O00526 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK2O00526 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK2O00526 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 AKAP8P1-201ENST00000434743 1349 ntBASIC12.88□□□□□ -0.35
UPK2O00526 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 AL691432.1-201ENST00000596308 1422 ntBASIC12.88□□□□□ -0.35
UPK2O00526 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms