Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC004980.1-204ENST00000429707 299 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TSPY20P-201ENST00000450910 630 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC002558.1-201ENST00000488906 803 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC009065.1-201ENST00000564055 1225 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC026271.3-201ENST00000571884 352 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC004899.2-201ENST00000622993 3860 ntBASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AL359736.2-201ENST00000621992 437 ntBASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 HOXB1-202ENST00000577092 1414 ntBASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AL135905.2-201ENST00000584934 1404 ntBASIC14.02□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms