Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 GPALPP1-207ENST00000611650 899 ntBASIC16.09■□□□□ 0.17
CFAP99D6REC4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.09■□□□□ 0.17
CFAP99D6REC4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFAP99D6REC4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.09■□□□□ 0.17
CFAP99D6REC4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CFAP99D6REC4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CFAP99D6REC4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.08■□□□□ 0.17
CFAP99D6REC4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CFAP99D6REC4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CFAP99D6REC4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CFAP99D6REC4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CFAP99D6REC4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CFAP99D6REC4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 ALG1L8P-201ENST00000533887 760 ntBASIC16.08■□□□□ 0.16
CFAP99D6REC4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 AC093520.2-201ENST00000561830 333 ntBASIC16.08■□□□□ 0.16
CFAP99D6REC4 RARRES2P9-201ENST00000565168 469 ntBASIC16.08■□□□□ 0.16
CFAP99D6REC4 AP001160.2-201ENST00000596071 487 ntBASIC16.08■□□□□ 0.16
CFAP99D6REC4 AC006538.3-201ENST00000612495 578 ntBASIC16.08■□□□□ 0.16
CFAP99D6REC4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.08■□□□□ 0.16
CFAP99D6REC4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP99D6REC4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 FAM58DP-201ENST00000428076 619 ntBASIC16.07■□□□□ 0.16
CFAP99D6REC4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AP3S2-216ENST00000617003 1561 ntBASIC16.07■□□□□ 0.16
CFAP99D6REC4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms