Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AC051619.7-201ENST00000568314 623 ntBASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 RN7SL828P-201ENST00000607615 303 ntBASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AC093028.1-201ENST00000622998 982 ntBASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CETN4P-206ENST00000642099 2168 ntBASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.67□□□□□ -0.54
SMIM9A6NGZ8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 CYP2T1P-202ENST00000641596 2535 ntBASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SERBP1P3-201ENST00000459980 809 ntBASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 HLA-V-204ENST00000476601 1289 ntBASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 AL158211.3-201ENST00000607385 239 ntBASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM9A6NGZ8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms