Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 HLA-H-201ENST00000383620 1096 ntBASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 AL512638.1-201ENST00000457493 794 ntBASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPDC1A2A3K4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 AL035633.1-201ENST00000406139 838 ntBASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 AC092580.3-201ENST00000430932 139 ntBASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTPDC1A2A3K4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 UGT1A2P-201ENST00000454886 866 ntBASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 AC098859.1-201ENST00000502915 1238 ntBASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPDC1A2A3K4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms