Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 NME2-201ENST00000393183 568 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 LBH-204ENST00000406087 559 ntTSL 4 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL450487.1-201ENST00000426799 995 ntBASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL513190.1-201ENST00000621254 727 ntBASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC104109.2-201ENST00000602919 1418 ntBASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-3A0A0A0MS03 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 FAM220BP-201ENST00000377689 816 ntBASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AL645939.2-201ENST00000427340 991 ntBASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC097359.3-201ENST00000603982 1210 ntBASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC106881.1-201ENST00000605849 3329 ntBASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC013726.1-201ENST00000563747 2285 ntBASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-3A0A0A0MS03 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 LINC00528-201ENST00000600723 2160 ntBASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 AKAP8P1-201ENST00000434743 1349 ntBASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC007967.2-201ENST00000432613 625 ntBASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBV5-3A0A0A0MS03 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms