Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 SPDYE14P-201ENST00000442619 822 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC243562.2-201ENST00000561247 970 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC003101.2-201ENST00000612557 442 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 AP001059.3-201ENST00000619053 235 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 LINC00628-201ENST00000628516 1289 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 LINC02447-202ENST00000501888 2146 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 CDC14C-201ENST00000428251 1719 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC067930.6-201ENST00000623257 4947 ntBASIC16.16■□□□□ 0.18
PKP3Q9Y446 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PKP3Q9Y446 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PKP3Q9Y446 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 TSEN15P1-201ENST00000423257 515 ntBASIC16.15■□□□□ 0.18
PKP3Q9Y446 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 AL139010.1-201ENST00000454878 894 ntBASIC16.15■□□□□ 0.18
PKP3Q9Y446 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 MIR6080-201ENST00000617359 66 ntBASIC16.15■□□□□ 0.18
PKP3Q9Y446 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP3Q9Y446 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PKP3Q9Y446 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PKP3Q9Y446 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 AC069224.1-201ENST00000566372 1715 ntBASIC16.14■□□□□ 0.17
PKP3Q9Y446 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 HLA-J-203ENST00000494367 1087 ntBASIC16.14■□□□□ 0.17
PKP3Q9Y446 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 AC006538.3-201ENST00000612495 578 ntBASIC16.14■□□□□ 0.17
PKP3Q9Y446 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PKP3Q9Y446 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP3Q9Y446 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms