Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 MIR940-201ENST00000401276 94 ntBASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 RARRES2P8-201ENST00000566335 367 ntBASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 AC138035.3-201ENST00000622706 2791 ntBASIC15.7■□□□□ 0.1
RNF11Q9Y3C5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF11Q9Y3C5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 CICP13-201ENST00000422015 2789 ntBASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 MIR4321-201ENST00000592276 80 ntBASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 AC091812.2-201ENST00000619081 385 ntBASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF11Q9Y3C5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms