Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 MRPL20P1-201ENST00000400819 433 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 HMGA1P7-201ENST00000406908 502 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 AP001282.1-201ENST00000531301 1499 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 AP002469.2-201ENST00000531724 424 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 AL009178.2-201ENST00000597278 2719 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 MIR1199-201ENST00000621445 119 ntBASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2D4Q9Y2X8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 PCDHA3-202ENST00000532566 4594 ntBASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms