Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 AL161772.1-201ENST00000610494 4412 ntBASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 AC241585.1-201ENST00000433527 519 ntBASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 AC004890.2-204ENST00000481968 304 ntBASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 AC018695.7-201ENST00000624587 2492 ntBASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FNDC3AQ9Y2H6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
FNDC3AQ9Y2H6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 AC005622.1-201ENST00000636801 1703 ntBASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.45■□□□□ 0.22
FNDC3AQ9Y2H6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms