Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 AC004987.2-201ENST00000395959 1148 ntBASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 MIR6080-201ENST00000617359 66 ntBASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 AP001059.3-201ENST00000619053 235 ntBASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 BANF1P1-201ENST00000553684 263 ntBASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 AC079781.4-201ENST00000641908 219 ntBASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4E1Q9UPM8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AC105021.1-202ENST00000570572 669 ntBASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP4E1Q9UPM8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.64■□□□□ 0.26
AP4E1Q9UPM8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.64■□□□□ 0.26
AP4E1Q9UPM8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 AC105917.1-201ENST00000506637 2539 ntBASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP4E1Q9UPM8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms