Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB4Q9UN71 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB4Q9UN71 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGB4Q9UN71 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 AC097376.2-205ENST00000610159 5334 ntBASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB4Q9UN71 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 AL121912.1-201ENST00000603683 238 ntBASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 OR2I1P-209ENST00000641730 5365 ntBASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB4Q9UN71 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms