Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 AC092337.1-201ENST00000568699 1129 ntBASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 AC140912.1-201ENST00000577171 1054 ntBASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AL391825.1-201ENST00000457671 1364 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 Z97205.2-201ENST00000564697 1639 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 PCDHA12-202ENST00000613593 2588 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 TP53TG3HP-202ENST00000569755 579 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AL358472.5-202ENST00000641448 1267 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 AC126755.1-201ENST00000525846 6405 ntBASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLCF1Q9UBD9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AL589987.1-201ENST00000453380 819 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms