Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18■□□□□ 0.47
COL20A1Q9P218 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18■□□□□ 0.47
COL20A1Q9P218 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 FAM86LP-201ENST00000478302 853 ntBASIC18■□□□□ 0.47
COL20A1Q9P218 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18■□□□□ 0.47
COL20A1Q9P218 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 HILS1-202ENST00000545329 423 ntBASIC18■□□□□ 0.47
COL20A1Q9P218 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18■□□□□ 0.47
COL20A1Q9P218 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
COL20A1Q9P218 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 LINC02199-201ENST00000506655 2702 ntBASIC18■□□□□ 0.47
COL20A1Q9P218 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL20A1Q9P218 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 AC124067.4-201ENST00000519691 2379 ntBASIC17.99■□□□□ 0.47
COL20A1Q9P218 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.99■□□□□ 0.47
COL20A1Q9P218 AC104596.2-201ENST00000512793 793 ntBASIC17.99■□□□□ 0.47
COL20A1Q9P218 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 MIR4313-201ENST00000580760 101 ntBASIC17.99■□□□□ 0.47
COL20A1Q9P218 AL033527.5-201ENST00000641382 801 ntBASIC17.99■□□□□ 0.47
COL20A1Q9P218 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL20A1Q9P218 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.99■□□□□ 0.47
COL20A1Q9P218 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 TTTY23B-201ENST00000442790 549 ntBASIC17.98■□□□□ 0.47
COL20A1Q9P218 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 BRI3BPP1-201ENST00000594224 787 ntBASIC17.98■□□□□ 0.47
COL20A1Q9P218 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL20A1Q9P218 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL20A1Q9P218 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms