Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FAAHP1-202ENST00000446499 1238 ntBASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AC098859.1-201ENST00000502915 1238 ntBASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AC007191.1-201ENST00000623179 2995 ntBASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AL031008.1-201ENST00000619963 541 ntBASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 AC004877.2-201ENST00000623941 599 ntBASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 SNX18-202ENST00000343017 3140 ntBASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC52A3Q9NQ40 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AC026748.1-201ENST00000624349 3251 ntBASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LINC00552-201ENST00000625151 2579 ntBASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 KRT19P2-202ENST00000557173 1012 ntBASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms