Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 DOC2GP-204ENST00000639052 2548 ntBASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 AL391005.1-201ENST00000623953 2435 ntBASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM62Q9BVG3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM62Q9BVG3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 BTBD7P1-201ENST00000447253 1453 ntBASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 SDHAP3-202ENST00000515467 728 ntBASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AC005498.2-205ENST00000593218 784 ntBASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AC011467.4-201ENST00000594891 528 ntBASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 AC112504.1-201ENST00000623415 1841 ntBASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM62Q9BVG3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM62Q9BVG3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms