Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 SCARNA2-201ENST00000458748 420 ntBASIC15.68■□□□□ 0.1
EBF4Q9BQW3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AC063926.3-201ENST00000624734 5658 ntBASIC15.68■□□□□ 0.1
EBF4Q9BQW3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 AC013726.1-201ENST00000563747 2285 ntBASIC15.68■□□□□ 0.1
EBF4Q9BQW3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.67■□□□□ 0.1
EBF4Q9BQW3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AC136632.2-201ENST00000512891 861 ntBASIC15.67■□□□□ 0.1
EBF4Q9BQW3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EBF4Q9BQW3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 AC018892.3-201ENST00000623986 2499 ntBASIC15.66■□□□□ 0.1
EBF4Q9BQW3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms