Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 RPS20P25-201ENST00000412447 352 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 AL392088.1-201ENST00000428364 670 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PRYP6-201ENST00000514804 343 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 RNA5SP421-201ENST00000516864 134 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC108359.1-201ENST00000616451 1211 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC093028.1-201ENST00000622998 982 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC027281.2-201ENST00000623856 713 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 AC007950.2-201ENST00000615045 2347 ntBASIC14.47□□□□□ -0.09
USB1Q9BQ65 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
USB1Q9BQ65 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
USB1Q9BQ65 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 AL391256.1-201ENST00000443260 1855 ntBASIC14.46□□□□□ -0.09
USB1Q9BQ65 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms