Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC105250.1-201ENST00000509378 2057 ntBASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC090616.6-203ENST00000579186 1945 ntBASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB40CQ96S21 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB40CQ96S21 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB40CQ96S21 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB40CQ96S21 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 NKAPP1-205ENST00000585790 367 ntBASIC13.08□□□□□ -0.32
RAB40CQ96S21 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AC004706.3-202ENST00000621574 984 ntBASIC13.08□□□□□ -0.32
RAB40CQ96S21 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AL805961.1-202ENST00000641562 540 ntBASIC13.08□□□□□ -0.32
RAB40CQ96S21 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB40CQ96S21 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB40CQ96S21 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 NUS1P2-201ENST00000417358 873 ntBASIC13.07□□□□□ -0.32
RAB40CQ96S21 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB40CQ96S21 HCG4P8-203ENST00000443049 980 ntBASIC13.07□□□□□ -0.32
RAB40CQ96S21 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB40CQ96S21 AC106795.1-205ENST00000512851 1056 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms