Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 PCDHA3-202ENST00000532566 4594 ntBASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 SPDYE21P-201ENST00000413323 827 ntBASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 NUS1P2-201ENST00000417358 873 ntBASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP6Q96FZ7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP6Q96FZ7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 AC005840.4-201ENST00000541242 2494 ntBASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms