Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 INGX-202ENST00000489074 768 ntBASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 MIR4453-201ENST00000584019 89 ntBASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 AC003101.2-201ENST00000612557 442 ntBASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 AC068418.2-201ENST00000577309 3703 ntBASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SH3KBP1Q96B97 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 BCRP1-201ENST00000444246 691 ntBASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 IGHV3-42-201ENST00000520410 361 ntBASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AC007967.4-201ENST00000614700 386 ntBASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AJ011932.1-201ENST00000621707 465 ntBASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 AL035456.1-201ENST00000456064 1369 ntBASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
SH3KBP1Q96B97 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
SH3KBP1Q96B97 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 AL512638.1-201ENST00000457493 794 ntBASIC15.95■□□□□ 0.14
SH3KBP1Q96B97 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms