Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CPNE4Q96A23 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.46□□□□□ -0.1
CPNE4Q96A23 LINC00554-201ENST00000564841 3011 ntBASIC14.46□□□□□ -0.1
CPNE4Q96A23 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CPNE4Q96A23 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CPNE4Q96A23 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CPNE4Q96A23 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.46□□□□□ -0.1
CPNE4Q96A23 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
CPNE4Q96A23 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.46□□□□□ -0.1
CPNE4Q96A23 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CPNE4Q96A23 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CPNE4Q96A23 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 AC079328.2-201ENST00000561241 3354 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 PCDHA1-201ENST00000378133 2726 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 HLA-V-204ENST00000476601 1289 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 BANF1P1-201ENST00000553684 263 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 AC006449.5-201ENST00000610658 2098 ntBASIC14.45□□□□□ -0.1
CPNE4Q96A23 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CPNE4Q96A23 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.45□□□□□ -0.1
CPNE4Q96A23 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 AC092364.2-201ENST00000596710 2692 ntBASIC14.44□□□□□ -0.1
CPNE4Q96A23 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 IGHV3-42-201ENST00000520410 361 ntBASIC14.44□□□□□ -0.1
CPNE4Q96A23 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 AL589739.1-201ENST00000607720 493 ntBASIC14.44□□□□□ -0.1
CPNE4Q96A23 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CPNE4Q96A23 AP001282.1-201ENST00000531301 1499 ntBASIC14.44□□□□□ -0.1
CPNE4Q96A23 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CPNE4Q96A23 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.43□□□□□ -0.1
CPNE4Q96A23 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPNE4Q96A23 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms