Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MED15P3-201ENST00000413613 326 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AL592076.1-201ENST00000424448 303 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 B9D1-206ENST00000461069 923 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CHCHD2P9-201ENST00000461726 456 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 BCRP4-201ENST00000506079 804 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CDCA4P4-201ENST00000435216 680 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC093106.1-201ENST00000437271 352 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC025186.1-201ENST00000478174 870 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 POU5F1P2-201ENST00000521750 823 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC139713.2-207ENST00000641556 1292 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC092570.1-201ENST00000414446 469 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC114812.1-204ENST00000449669 728 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MIR4683-201ENST00000579659 81 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC099343.1-201ENST00000513481 609 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MST1L-204ENST00000545160 559 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC006483.2-201ENST00000609813 515 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC106785.2-201ENST00000564385 1319 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC012441.2-201ENST00000444843 739 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 CHMP1AP1-201ENST00000445563 662 ntBASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNE2Q8WXH0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms