Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2AF1L4Q8WU68 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2AF1L4Q8WU68 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 AC104596.2-201ENST00000512793 793 ntBASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 AC092337.1-201ENST00000568699 1129 ntBASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2AF1L4Q8WU68 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 SLC25A47P1-201ENST00000531577 414 ntBASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
U2AF1L4Q8WU68 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 CSF2RBP1-201ENST00000447905 391 ntBASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms