Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 HLA-H-201ENST00000383620 1096 ntBASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCC2Q8TAQ2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AC022532.1-201ENST00000624563 1728 ntBASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AL691432.1-201ENST00000596308 1422 ntBASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 FAM220BP-201ENST00000377689 816 ntBASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AC024267.1-201ENST00000582320 895 ntBASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCC2Q8TAQ2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SMARCC2Q8TAQ2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCC2Q8TAQ2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms