Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 TERF1P3-201ENST00000505638 1227 ntBASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 AC027369.6-201ENST00000525520 931 ntBASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 RN7SL204P-201ENST00000582831 262 ntBASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDND2Q8NHS1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDND2Q8NHS1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 LINC02228-204ENST00000642115 2962 ntBASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 FAM220BP-201ENST00000377689 816 ntBASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AL353705.2-201ENST00000428243 662 ntBASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SPDYE12P-201ENST00000618416 771 ntBASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AL139011.1-202ENST00000642063 584 ntBASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDND2Q8NHS1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms