Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 RBFOX1-224ENST00000641259 3651 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AL353597.3-201ENST00000624365 3745 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AL137244.1-201ENST00000422931 865 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 SERBP1P5-201ENST00000510079 1181 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MARK2P13-201ENST00000419108 1849 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CNBD2-201ENST00000349339 1927 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 AC006116.8-202ENST00000587620 1550 ntBASIC9.83□□□□□ -0.84
SVIPQ8NHG7 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CAPN3-203ENST00000349748 2955 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MEF2C-213ENST00000508569 1882 ntTSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC9.83□□□□□ -0.84
SVIPQ8NHG7 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AC027801.2-201ENST00000515692 1816 ntTSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AL442125.1-201ENST00000619092 3362 ntBASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AC090643.2-201ENST00000623442 2029 ntBASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AC007614.5-201ENST00000623424 8892 ntBASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PIFO-202ENST00000369738 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 AC011474.4-201ENST00000623523 2076 ntBASIC9.82□□□□□ -0.84
SVIPQ8NHG7 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 PCNX4-204ENST00000406949 3513 ntTSL 2 BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SVIPQ8NHG7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms