Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LINC02447-202ENST00000501888 2146 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 AL136982.4-201ENST00000437689 1740 ntBASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 AC125807.1-201ENST00000483097 614 ntBASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 RN7SL828P-201ENST00000607615 303 ntBASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC148Q8NFR7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC148Q8NFR7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 MTND6P24-201ENST00000440466 518 ntBASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 KLF2P3-201ENST00000451977 1087 ntBASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC148Q8NFR7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 AC134407.2-201ENST00000625089 1978 ntBASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 AC051619.7-201ENST00000568314 623 ntBASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 AC063926.3-201ENST00000624734 5658 ntBASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 AC011477.6-201ENST00000604980 1927 ntBASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC148Q8NFR7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms