Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AL645939.2-201ENST00000427340 991 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AC105233.2-201ENST00000523697 349 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AF228730.5-201ENST00000530288 346 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AC027796.2-201ENST00000575326 344 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 AC020765.3-201ENST00000613051 740 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 CDC14C-201ENST00000428251 1719 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP11CQ8NB49 LINC02447-202ENST00000501888 2146 ntBASIC16.81■□□□□ 0.28
ATP11CQ8NB49 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 MIR346-201ENST00000362234 95 ntBASIC16.8■□□□□ 0.28
ATP11CQ8NB49 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP11CQ8NB49 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC073439.1-201ENST00000624121 1774 ntBASIC16.79■□□□□ 0.28
ATP11CQ8NB49 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC106028.4-201ENST00000614509 607 ntBASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC084121.4-201ENST00000641598 221 ntBASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AF228730.8-201ENST00000642140 221 ntBASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AC126177.1-201ENST00000547829 2218 ntBASIC16.79■□□□□ 0.28
ATP11CQ8NB49 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP11CQ8NB49 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms