Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AL359881.2-201ENST00000602973 570 ntBASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AC009118.2-201ENST00000613275 655 ntBASIC16.09■□□□□ 0.17
LSMEM2Q8N112 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM2Q8N112 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.08■□□□□ 0.17
LSMEM2Q8N112 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AC241585.1-201ENST00000433527 519 ntBASIC16.08■□□□□ 0.16
LSMEM2Q8N112 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 WASH6P-202ENST00000359512 1437 ntBASIC16.08■□□□□ 0.16
LSMEM2Q8N112 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LSMEM2Q8N112 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 AC008267.7-201ENST00000624570 1194 ntBASIC16.07■□□□□ 0.16
LSMEM2Q8N112 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 TCAF2P1-201ENST00000291129 2421 ntBASIC16.07■□□□□ 0.16
LSMEM2Q8N112 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSMEM2Q8N112 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms