Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 CYP2A7P1-201ENST00000595391 815 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC244093.1-201ENST00000610837 814 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC078925.2-201ENST00000624013 1973 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AL603756.1-201ENST00000606511 2163 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC098850.1-201ENST00000419919 790 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 RNA5SP410-201ENST00000516285 106 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 MIR4492-201ENST00000581627 80 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC015936.2-201ENST00000593177 259 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 WFDC1-204ENST00000613603 549 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF135Q8IUD6 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
RNF135Q8IUD6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 BRWD1P1-201ENST00000401091 371 ntBASIC17.02■□□□□ 0.32
RNF135Q8IUD6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF135Q8IUD6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms