Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RAB43Q86YS6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB43Q86YS6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB43Q86YS6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB43Q86YS6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB43Q86YS6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB43Q86YS6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB43Q86YS6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB43Q86YS6 AC126755.1-201ENST00000525846 6405 ntBASIC15.43■□□□□ 0.06
RAB43Q86YS6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 AL035456.1-201ENST00000456064 1369 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 AC092580.3-201ENST00000430932 139 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 RN7SL204P-201ENST00000582831 262 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 SPTSSB-204ENST00000617024 1292 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 AC099063.4-201ENST00000641099 1602 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 KRT8P39-201ENST00000396270 1433 ntBASIC15.42■□□□□ 0.06
RAB43Q86YS6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB43Q86YS6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RAB43Q86YS6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 FAM220BP-201ENST00000377689 816 ntBASIC15.41■□□□□ 0.06
RAB43Q86YS6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 LINC02560-201ENST00000596379 459 ntBASIC15.41■□□□□ 0.06
RAB43Q86YS6 AC008761.3-201ENST00000624803 892 ntBASIC15.41■□□□□ 0.06
RAB43Q86YS6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 AC104640.1-201ENST00000562617 2109 ntBASIC15.41■□□□□ 0.06
RAB43Q86YS6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB43Q86YS6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB43Q86YS6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 AC073439.1-201ENST00000624121 1774 ntBASIC15.4■□□□□ 0.06
RAB43Q86YS6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms