Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE11-202ENST00000450699 704 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 TIMM8BP1-201ENST00000452384 211 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AP000344.2-201ENST00000512987 629 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE9P-201ENST00000570642 692 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AC026120.1-201ENST00000611536 926 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE10P-202ENST00000612005 668 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE8P-202ENST00000612377 668 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AC011477.6-201ENST00000604980 1927 ntBASIC14.83□□□□□ -0.04
ZNF550Q7Z398 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.82□□□□□ -0.04
ZNF550Q7Z398 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AC004461.1-201ENST00000412461 403 ntBASIC14.82□□□□□ -0.04
ZNF550Q7Z398 TSEN15P1-201ENST00000423257 515 ntBASIC14.82□□□□□ -0.04
ZNF550Q7Z398 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 AC093028.1-201ENST00000622998 982 ntBASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 PAUPAR-201ENST00000630360 2965 ntBASIC14.82□□□□□ -0.04
ZNF550Q7Z398 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF550Q7Z398 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms