Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC005363.2-201ENST00000618631 242 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AC073912.3-201ENST00000624414 853 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 KRT8P49-201ENST00000604166 1432 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ECEL1P3-201ENST00000427961 737 ntBASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 AC133561.5-201ENST00000635547 218 ntBASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP4Q6PIL6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC087499.1-201ENST00000418141 1075 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 MTCL1P1-201ENST00000446207 792 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms