Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SSRP1Q08945 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 SPDYE7P-202ENST00000420373 878 ntBASIC18.62■□□□□ 0.57
SSRP1Q08945 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 HLA-J-203ENST00000494367 1087 ntBASIC18.62■□□□□ 0.57
SSRP1Q08945 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 BANF1P1-201ENST00000553684 263 ntBASIC18.62■□□□□ 0.57
SSRP1Q08945 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SSRP1Q08945 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.62■□□□□ 0.57
SSRP1Q08945 MIR6080-201ENST00000617359 66 ntBASIC18.62■□□□□ 0.57
SSRP1Q08945 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SSRP1Q08945 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.62■□□□□ 0.57
SSRP1Q08945 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SSRP1Q08945 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SSRP1Q08945 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.61■□□□□ 0.57
SSRP1Q08945 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SSRP1Q08945 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.61■□□□□ 0.57
SSRP1Q08945 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SSRP1Q08945 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SSRP1Q08945 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 AC109322.1-201ENST00000524499 1264 ntBASIC18.61■□□□□ 0.57
SSRP1Q08945 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.61■□□□□ 0.57
SSRP1Q08945 AL512356.2-201ENST00000546955 174 ntBASIC18.61■□□□□ 0.57
SSRP1Q08945 AC007967.4-201ENST00000614700 386 ntBASIC18.61■□□□□ 0.57
SSRP1Q08945 AC139530.3-201ENST00000620344 690 ntBASIC18.61■□□□□ 0.57
SSRP1Q08945 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSRP1Q08945 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.61■□□□□ 0.57
SSRP1Q08945 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
SSRP1Q08945 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.6■□□□□ 0.57
SSRP1Q08945 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SSRP1Q08945 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SSRP1Q08945 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 AL139400.1-201ENST00000366220 510 ntBASIC18.6■□□□□ 0.57
SSRP1Q08945 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SSRP1Q08945 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSRP1Q08945 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 TSEN15P1-201ENST00000423257 515 ntBASIC18.6■□□□□ 0.57
SSRP1Q08945 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.6■□□□□ 0.57
SSRP1Q08945 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.6■□□□□ 0.57
SSRP1Q08945 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 AP001160.2-201ENST00000596071 487 ntBASIC18.6■□□□□ 0.57
SSRP1Q08945 RN7SL828P-201ENST00000607615 303 ntBASIC18.6■□□□□ 0.57
SSRP1Q08945 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSRP1Q08945 REXO1L1P-202ENST00000608646 1974 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms