Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.39□□□□□ -0.43
HIST1H1AQ02539 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AC012640.2-201ENST00000561606 901 ntBASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AC020765.3-201ENST00000613051 740 ntBASIC12.39□□□□□ -0.43
HIST1H1AQ02539 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AL691432.3-201ENST00000621860 400 ntBASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AC148477.8-201ENST00000624298 468 ntBASIC12.39□□□□□ -0.43
HIST1H1AQ02539 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1AQ02539 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AC079781.3-201ENST00000449110 356 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 RN7SL510P-201ENST00000581311 263 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AC010654.1-201ENST00000615722 808 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AL773604.1-201ENST00000617417 272 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AC117500.6-201ENST00000624871 588 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 FAM215A-202ENST00000632077 792 ntBASIC12.38□□□□□ -0.43
HIST1H1AQ02539 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1AQ02539 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 GRK6P1-201ENST00000400595 1711 ntBASIC12.37□□□□□ -0.43
HIST1H1AQ02539 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms