Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 AL031713.1-201ENST00000564813 661 ntBASIC14.66□□□□□ -0.06
CACNA1BQ00975 AC007881.3-201ENST00000608897 607 ntBASIC14.66□□□□□ -0.06
CACNA1BQ00975 AL132780.4-201ENST00000624870 1135 ntBASIC14.66□□□□□ -0.06
CACNA1BQ00975 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 FRMD8P1-201ENST00000440433 1524 ntBASIC14.66□□□□□ -0.06
CACNA1BQ00975 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CACNA1BQ00975 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.66□□□□□ -0.06
CACNA1BQ00975 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 AC116345.2-201ENST00000512837 523 ntBASIC14.65□□□□□ -0.06
CACNA1BQ00975 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 AL161773.1-201ENST00000624845 863 ntBASIC14.65□□□□□ -0.06
CACNA1BQ00975 AC006453.4-201ENST00000636949 1252 ntBASIC14.65□□□□□ -0.06
CACNA1BQ00975 PRSS30P-206ENST00000641773 873 ntBASIC14.65□□□□□ -0.06
CACNA1BQ00975 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 CHCHD2P2-201ENST00000503744 321 ntBASIC14.65□□□□□ -0.06
CACNA1BQ00975 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.65□□□□□ -0.06
CACNA1BQ00975 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CACNA1BQ00975 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 REXO1L8P-201ENST00000604378 1897 ntBASIC14.64□□□□□ -0.07
CACNA1BQ00975 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AC010900.1-201ENST00000449849 1296 ntBASIC14.64□□□□□ -0.07
CACNA1BQ00975 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AL627230.2-201ENST00000613254 655 ntBASIC14.64□□□□□ -0.07
CACNA1BQ00975 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AC093724.1-201ENST00000448659 1027 ntBASIC14.64□□□□□ -0.07
CACNA1BQ00975 AL590640.2-201ENST00000457038 527 ntBASIC14.64□□□□□ -0.07
CACNA1BQ00975 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.64□□□□□ -0.07
CACNA1BQ00975 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CACNA1BQ00975 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms