Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK5Q00535 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDK5Q00535 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 KRT18P67-201ENST00000432816 1264 ntBASIC14.51□□□□□ -0.09
CDK5Q00535 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 RHOQP3-201ENST00000437982 621 ntBASIC14.51□□□□□ -0.09
CDK5Q00535 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 AF186996.4-201ENST00000467186 377 ntBASIC14.51□□□□□ -0.09
CDK5Q00535 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK5Q00535 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK5Q00535 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.51□□□□□ -0.09
CDK5Q00535 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CDK5Q00535 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.5□□□□□ -0.09
CDK5Q00535 UNC93B7-201ENST00000509439 705 ntBASIC14.5□□□□□ -0.09
CDK5Q00535 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.5□□□□□ -0.09
CDK5Q00535 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 AC096734.2-201ENST00000562054 433 ntBASIC14.5□□□□□ -0.09
CDK5Q00535 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.5□□□□□ -0.09
CDK5Q00535 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.5□□□□□ -0.09
CDK5Q00535 AC148477.8-201ENST00000624298 468 ntBASIC14.5□□□□□ -0.09
CDK5Q00535 FAM215A-202ENST00000632077 792 ntBASIC14.5□□□□□ -0.09
CDK5Q00535 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDK5Q00535 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK5Q00535 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK5Q00535 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK5Q00535 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDK5Q00535 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK5Q00535 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK5Q00535 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDK5Q00535 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK5Q00535 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK5Q00535 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms