Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM4P67936 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM4P67936 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 KRT18P21-201ENST00000515767 1272 ntBASIC18.07■□□□□ 0.48
TPM4P67936 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.07■□□□□ 0.48
TPM4P67936 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TPM4P67936 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM4P67936 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TPM4P67936 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM4P67936 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 AC011477.6-201ENST00000604980 1927 ntBASIC18.06■□□□□ 0.48
TPM4P67936 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.06■□□□□ 0.48
TPM4P67936 AL121772.3-201ENST00000610840 674 ntBASIC18.06■□□□□ 0.48
TPM4P67936 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM4P67936 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM4P67936 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM4P67936 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TPM4P67936 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM4P67936 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 AC245100.5-201ENST00000452108 331 ntBASIC18.05■□□□□ 0.48
TPM4P67936 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 AC136632.2-201ENST00000512891 861 ntBASIC18.05■□□□□ 0.48
TPM4P67936 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.05■□□□□ 0.48
TPM4P67936 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 MIR4515-201ENST00000584082 81 ntBASIC18.05■□□□□ 0.48
TPM4P67936 AC025062.2-201ENST00000605477 670 ntBASIC18.05■□□□□ 0.48
TPM4P67936 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM4P67936 AL365330.1-201ENST00000607459 531 ntBASIC18.05■□□□□ 0.48
TPM4P67936 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM4P67936 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms