Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 AC004449.1-201ENST00000564240 433 ntBASIC15.66■□□□□ 0.1
YBX1P67809 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 Z92544.3-201ENST00000624747 417 ntBASIC15.66■□□□□ 0.1
YBX1P67809 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.66■□□□□ 0.1
YBX1P67809 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.66■□□□□ 0.1
YBX1P67809 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
YBX1P67809 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YBX1P67809 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
YBX1P67809 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
YBX1P67809 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 AC022532.1-201ENST00000624563 1728 ntBASIC15.65■□□□□ 0.1
YBX1P67809 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
YBX1P67809 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
YBX1P67809 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
YBX1P67809 HLA-H-201ENST00000383620 1096 ntBASIC15.65■□□□□ 0.1
YBX1P67809 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.65■□□□□ 0.1
YBX1P67809 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.65■□□□□ 0.1
YBX1P67809 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.65■□□□□ 0.1
YBX1P67809 MIR4453-201ENST00000584019 89 ntBASIC15.65■□□□□ 0.1
YBX1P67809 AP001059.3-201ENST00000619053 235 ntBASIC15.65■□□□□ 0.1
YBX1P67809 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.65■□□□□ 0.1
YBX1P67809 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.65■□□□□ 0.1
YBX1P67809 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YBX1P67809 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.65■□□□□ 0.1
YBX1P67809 AC136621.1-201ENST00000624017 2304 ntBASIC15.65■□□□□ 0.1
YBX1P67809 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
YBX1P67809 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.64■□□□□ 0.09
YBX1P67809 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.64■□□□□ 0.09
YBX1P67809 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.64■□□□□ 0.09
YBX1P67809 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.64■□□□□ 0.09
YBX1P67809 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.64■□□□□ 0.09
YBX1P67809 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YBX1P67809 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms