Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 LINC00895-201ENST00000629028 1637 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5BP61020 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5BP61020 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RAB5BP61020 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 KRT18P23-201ENST00000435622 1283 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB5BP61020 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5BP61020 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5BP61020 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.59□□□□□ -0.39
RAB5BP61020 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5BP61020 AC083964.2-201ENST00000623988 2396 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 C18orf15-201ENST00000623680 2534 ntBASIC12.59□□□□□ -0.39
RAB5BP61020 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5BP61020 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5BP61020 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.58□□□□□ -0.39
RAB5BP61020 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5BP61020 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5BP61020 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5BP61020 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5BP61020 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.58□□□□□ -0.39
RAB5BP61020 AC011474.4-201ENST00000623523 2076 ntBASIC12.58□□□□□ -0.39
RAB5BP61020 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
RAB5BP61020 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 AC112693.3-201ENST00000624819 1983 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
RAB5BP61020 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB5BP61020 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 AC002558.1-201ENST00000488906 803 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB5BP61020 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB5BP61020 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5BP61020 AC060766.5-201ENST00000590539 871 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 AC105206.1-202ENST00000314927 2368 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 GPR89P-201ENST00000407924 1495 ntBASIC12.58□□□□□ -0.4
RAB5BP61020 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5BP61020 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5BP61020 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms