Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.74■□□□□ 0.27
ERVFC1P60507 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.74■□□□□ 0.27
ERVFC1P60507 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.74■□□□□ 0.27
ERVFC1P60507 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.74■□□□□ 0.27
ERVFC1P60507 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.74■□□□□ 0.27
ERVFC1P60507 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.74■□□□□ 0.27
ERVFC1P60507 RN7SL560P-201ENST00000577943 264 ntBASIC16.74■□□□□ 0.27
ERVFC1P60507 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.74■□□□□ 0.27
ERVFC1P60507 AL450472.2-201ENST00000603663 1156 ntBASIC16.74■□□□□ 0.27
ERVFC1P60507 AL139099.5-201ENST00000635274 300 ntBASIC16.74■□□□□ 0.27
ERVFC1P60507 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.74■□□□□ 0.27
ERVFC1P60507 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
ERVFC1P60507 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERVFC1P60507 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.74■□□□□ 0.27
ERVFC1P60507 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERVFC1P60507 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERVFC1P60507 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AC090340.1-201ENST00000620778 4980 ntBASIC16.73■□□□□ 0.27
ERVFC1P60507 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.73■□□□□ 0.27
ERVFC1P60507 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.73■□□□□ 0.27
ERVFC1P60507 C2orf69P2-201ENST00000562032 1123 ntBASIC16.73■□□□□ 0.27
ERVFC1P60507 DUX4L45-201ENST00000566406 1057 ntBASIC16.73■□□□□ 0.27
ERVFC1P60507 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AC000095.1-201ENST00000603208 874 ntBASIC16.73■□□□□ 0.27
ERVFC1P60507 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AC091271.1-201ENST00000611877 1162 ntBASIC16.73■□□□□ 0.27
ERVFC1P60507 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.73■□□□□ 0.27
ERVFC1P60507 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERVFC1P60507 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERVFC1P60507 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 AL607033.1-201ENST00000623900 1599 ntBASIC16.72■□□□□ 0.27
ERVFC1P60507 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.72■□□□□ 0.27
ERVFC1P60507 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.72■□□□□ 0.27
ERVFC1P60507 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 AL121723.1-201ENST00000445194 1519 ntBASIC16.72■□□□□ 0.27
ERVFC1P60507 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
ERVFC1P60507 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.72■□□□□ 0.27
ERVFC1P60507 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ERVFC1P60507 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.72■□□□□ 0.27
ERVFC1P60507 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.72■□□□□ 0.27
ERVFC1P60507 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.72■□□□□ 0.27
ERVFC1P60507 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.72■□□□□ 0.27
ERVFC1P60507 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ERVFC1P60507 AC097359.3-201ENST00000603982 1210 ntBASIC16.72■□□□□ 0.27
ERVFC1P60507 AC008687.7-202ENST00000637404 953 ntBASIC16.72■□□□□ 0.27
ERVFC1P60507 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 AP001282.1-201ENST00000531301 1499 ntBASIC16.72■□□□□ 0.27
ERVFC1P60507 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
ERVFC1P60507 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERVFC1P60507 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERVFC1P60507 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms