Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 AKAP8P1-201ENST00000434743 1349 ntBASIC15.29■□□□□ 0.04
CLDN8P56748 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN8P56748 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN8P56748 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN8P56748 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN8P56748 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN8P56748 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN8P56748 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN8P56748 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN8P56748 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN8P56748 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN8P56748 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN8P56748 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN8P56748 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN8P56748 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.28■□□□□ 0.04
CLDN8P56748 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN8P56748 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 AC092127.1-201ENST00000567093 3455 ntBASIC15.28■□□□□ 0.04
CLDN8P56748 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CLDN8P56748 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CLDN8P56748 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN8P56748 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN8P56748 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN8P56748 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN8P56748 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 BNIP3P1-202ENST00000550043 1585 ntBASIC15.28■□□□□ 0.04
CLDN8P56748 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CLDN8P56748 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN8P56748 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN8P56748 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLDN8P56748 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN8P56748 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 IL9RP2-201ENST00000423948 1312 ntBASIC15.27■□□□□ 0.04
CLDN8P56748 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN8P56748 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDN8P56748 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN8P56748 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN8P56748 AC092865.6-201ENST00000642101 219 ntBASIC15.27■□□□□ 0.04
CLDN8P56748 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN8P56748 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CLDN8P56748 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN8P56748 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.27■□□□□ 0.03
CLDN8P56748 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN8P56748 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 AC023824.1-201ENST00000562945 2975 ntBASIC15.27■□□□□ 0.03
CLDN8P56748 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN8P56748 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.27■□□□□ 0.03
CLDN8P56748 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN8P56748 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms