Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.96□□□□□ -0.49
CMC4P56277 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 AC241585.1-201ENST00000433527 519 ntBASIC11.96□□□□□ -0.49
CMC4P56277 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.96□□□□□ -0.49
CMC4P56277 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.96□□□□□ -0.49
CMC4P56277 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.96□□□□□ -0.49
CMC4P56277 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
CMC4P56277 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.96□□□□□ -0.5
CMC4P56277 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CMC4P56277 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
CMC4P56277 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.96□□□□□ -0.5
CMC4P56277 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CMC4P56277 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 AC055876.3-201ENST00000431496 288 ntBASIC11.95□□□□□ -0.5
CMC4P56277 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.95□□□□□ -0.5
CMC4P56277 RFPL4AP1-201ENST00000530883 850 ntBASIC11.95□□□□□ -0.5
CMC4P56277 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.95□□□□□ -0.5
CMC4P56277 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.95□□□□□ -0.5
CMC4P56277 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 AC138649.4-201ENST00000612222 287 ntBASIC11.95□□□□□ -0.5
CMC4P56277 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 MYO15B-237ENST00000642007 4893 ntBASIC11.95□□□□□ -0.5
CMC4P56277 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CMC4P56277 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CMC4P56277 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CMC4P56277 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 CYP4F24P-201ENST00000586049 1580 ntBASIC11.95□□□□□ -0.5
CMC4P56277 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
CMC4P56277 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CMC4P56277 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.95□□□□□ -0.5
CMC4P56277 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CMC4P56277 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 AL513523.2-202ENST00000427283 2040 ntBASIC11.94□□□□□ -0.5
CMC4P56277 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms