Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC099336.1-201ENST00000417053 1171 ntBASIC18.88■□□□□ 0.61
CACNB3P54284 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC134915.1-201ENST00000426461 574 ntBASIC18.88■□□□□ 0.61
CACNB3P54284 KLF2P4-201ENST00000451959 1225 ntBASIC18.88■□□□□ 0.61
CACNB3P54284 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNB3P54284 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNB3P54284 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNB3P54284 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNB3P54284 AL049840.4-201ENST00000602422 811 ntBASIC18.88■□□□□ 0.61
CACNB3P54284 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.88■□□□□ 0.61
CACNB3P54284 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CACNB3P54284 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CACNB3P54284 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CACNB3P54284 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CACNB3P54284 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CACNB3P54284 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CACNB3P54284 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNB3P54284 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 SLED1-202ENST00000512051 380 ntBASIC18.87■□□□□ 0.61
CACNB3P54284 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNB3P54284 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNB3P54284 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNB3P54284 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 MIR4525-201ENST00000580000 75 ntBASIC18.87■□□□□ 0.61
CACNB3P54284 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNB3P54284 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNB3P54284 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNB3P54284 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 AL607033.1-201ENST00000623900 1599 ntBASIC18.86■□□□□ 0.61
CACNB3P54284 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNB3P54284 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CACNB3P54284 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CACNB3P54284 HAUS4P1-201ENST00000406739 1145 ntBASIC18.86■□□□□ 0.61
CACNB3P54284 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNB3P54284 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNB3P54284 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNB3P54284 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CACNB3P54284 AP001889.1-201ENST00000525414 633 ntBASIC18.86■□□□□ 0.61
CACNB3P54284 AL583810.1-201ENST00000553344 1045 ntBASIC18.86■□□□□ 0.61
CACNB3P54284 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CACNB3P54284 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNB3P54284 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CACNB3P54284 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CACNB3P54284 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CACNB3P54284 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB3P54284 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNB3P54284 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms